Jelmer Wolterink

Publications

• AI-Based Quantification of Planned Radiation Therapy Dose to Cardiac Structures and Coronary Arteries in Patients With Breast Cancer
  van Velzen, Sanne G M, Bruns, Steffen, Wolterink, Jelmer M, Leiner, Tim, Viergever, Max A, Verkooijen, Helena M, Išgum, Ivana Sep 2021 in International Journal of Radiation Oncology Biology Physics
• Six months vitamin K treatment does not affect systemic arterial calcification or bone mineral density in diabetes mellitus 2
  Bartstra, Jonas W., Draaisma, Fieke, Zwakenberg, Sabine R., Lessmann, Nikolas, Wolterink, Jelmer M., van der Schouw, Yvonne T., de Jong, Pim A., Beulens, Joline W. J. Apr 2021 in European Journal of Nutrition 60 (3), p. 1691-1699
• Combined analysis of coronary arteries and the left ventricular myocardium in cardiac CT angiography for detection of patients with functionally significant stenosis
  Zreik, Majd, Hampe, Nils, Leiner, Tim, Khalili, Nadih, Wolterink, Jelmer M., Voskuil, Michiel, Viergever, Max A., Išgum, Ivana 2021 in Combined analysis of coronary arteries and the left ventricular myocardium in cardiac CT angiography for detection of patients with functionally significant stenosis: Medical Imaging 2021 p. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11596)
• Deep learning analysis of coronary arteries in cardiac CT angiography for detection of patients requiring invasive coronary angiography
  Zreik, Majd, van Hamersvelt, Robbert W, Khalili, Nadieh, Wolterink, Jelmer M, Voskuil, Michiel, Viergever, Max A, Leiner, Tim, Isgum, Ivana May 2020 in IEEE Transactions on Medical Imaging 39 (5), p. 1545-1557
• Determinants of 18F-NaF uptake in femoral arteries in patients with type 2 diabetes mellitus
  Takx, Richard A P, van Asperen, Ruth, Bartstra, Jonas W, Zwakenberg, Sabine R, Wolterink, Jelmer M, Celeng, Csilla, de Jong, Pim A, Beulens, Joline W Mar 2020 in Journal of Nuclear Cardiology
• Deep Learning-Based Regression and Classification for Automatic Landmark Localization in Medical Images
  Noothout, Julia M H, De Vos, Bob D, Wolterink, Jelmer M, Postma, Elbrich M, Smeets, Paul A M, Takx, Richard A P, Leiner, Tim, Viergever, Max A, Isgum, Ivana Dec 2020 in IEEE Transactions on Medical Imaging 39 (12), p. 4011-4022
• Deep learning from dual-energy information for whole-heart segmentation in dual-energy and single-energy non-contrast-enhanced cardiac CT
  Bruns, Steffen, Wolterink, Jelmer M, Takx, Richard A P, van Hamersvelt, Robbert W, Suchá, Dominika, Viergever, Max A, Leiner, Tim, Išgum, Ivana Oct 2020 in Medical Physics 47 (10), p. 5048-5060
• Etidronate halts systemic arterial calcification in pseudoxanthoma elasticum
  Bartstra, Jonas W., de Jong, Pim A., Kranenburg, Guido, Wolterink, Jelmer M., Isgum, Ivana, Wijsman, Alayna, Wolf, Bas, den Harder, Annemarie M., Mali, Willem P.Th M., Spiering, Wilko Jan 2020 in Atherosclerosis 292 p. 37-41
• Vascular uptake on 18F-sodium fluoride positron emission tomography: precursor of vascular calcification?
  den Harder, Annemarie M, Wolterink, Jelmer M, Bartstra, Jonas W, Spiering, Wilko, Zwakenberg, Sabine R, Beulens, Joline W, Slart, Riemer H J A, Luurtsema, Gert, Mali, Willem P, de Jong, Pim A Jan 2020 in Journal of Nuclear Cardiology
• Automatic online quality control of synthetic CTs
  UMC, Amsterdam, Wolterink, Jelmer M., Verhoeff, Joost J.C., Išgum, Ivana 2020 in Automatic online quality control of synthetic CTs: Medical Imaging 2020 p. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11313)
• Exploiting clinically available delineations for cnn-based segmentation in radiotherapy treatment planning
  van Harten, LD, Wolterink, Jelmer M., Verhoeff, Joost J.C., Išgum, Ivana 2020 in Exploiting clinically available delineations for cnn-based segmentation in radiotherapy treatment planning: Medical Imaging 2020 p. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11313)
• Direct Automatic Coronary Calcium Scoring in Cardiac and Chest CT
  de Vos, Bob D., Wolterink, Jelmer M., Leiner, Tim, de Jong, Pim A., Lessmann, Nikolas, Isgum, Ivana Sep 2019 in IEEE Transactions on Medical Imaging 38 (9), p. 2127-2138
• State-of-the-Art Deep Learning in Cardiovascular Image Analysis
  Litjens, G., Ciompi, Francesco, Wolterink, Jelmer M., de Vos, B. D., Leiner, Tim, Teuwen, J., Išgum, I. Aug 2019 in JACC. Cardiovascular imaging 12 (8), p. 1549-1565
• A Recurrent CNN for Automatic Detection and Classification of Coronary Artery Plaque and Stenosis in Coronary CT Angiography
  Zreik, Majd, van Hamersvelt, Robbert W, Wolterink, Jelmer M, Leiner, Tim, Viergever, Max A, Isgum, Ivana Jul 2019 in IEEE Transactions on Medical Imaging 38 (7), p. 1588-1598
• Machine Learning for Assessment of Coronary Artery Disease in Cardiac CT: A Survey
  Hampe, Nils, Wolterink, Jelmer M, van Velzen, Sanne G M, Leiner, Tim, Išgum, Ivana Nov 2019 in Frontiers in cardiovascular medicine 6
• The effect of menaquinone-7 supplementation on vascular calcification in patients with diabetes: A randomized, double-blind, placebo-controlled trial
  Zwakenberg, S. R., De Jong, P. A., Bartstra, J. W., Van Asperen, R., Westerink, J., De Valk, H., Slart, R. H.J.A., Luurtsema, G., Wolterink, J. M., De Borst, G. J., Van Herwaarden, J. A., Van De Ree, M. A., Schurgers, L. J., Van Der Schouw, Y. T., Beulens, J. W.J. Oct 2019 in American Journal of Clinical Nutrition 110 (4), p. 883-890
• Knowledge-based and deep learning-based automated chest wall segmentation in magnetic resonance images of extremely dense breasts
  Verburg, Erik, Wolterink, Jelmer M., de Waard, Stephanie N., Išgum, Ivana, van Gils, Carla H., Veldhuis, Wouter B., Gilhuijs, Kenneth G.A. Oct 2019 in Medical Physics 46 (10), p. 4405-4416
• Coronary artery centerline extraction in cardiac CT angiography using a CNN-based orientation classifier
  Wolterink, Jelmer M., Hamersvelt, Robbert W.van, Viergever, Max A., Leiner, Tim, Išgum, Ivana Jan 2019 in Medical Image Analysis 51 p. 46-60
• Graph Convolutional Networks for Coronary Artery Segmentation in Cardiac CT Angiography
  Wolterink, Jelmer M., Leiner, Tim, Išgum, Ivana jan 2019 in Graph Convolutional Networks for Coronary Artery Segmentation in Cardiac CT Angiography: Graph Learning in Medical Imaging - 1st International Workshop, GLMI 2019, held in Conjunction with MICCAI 2019, Proceedings p. 62-69 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11849 LNCS)
• Adversarial Optimization for Joint Registration and Segmentation in Prostate CT Radiotherapy
  Elmahdy, Mohamed S., Wolterink, Jelmer M., Sokooti, Hessam, Išgum, Ivana, Staring, Marius jan 2019 in Adversarial Optimization for Joint Registration and Segmentation in Prostate CT Radiotherapy: Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings p. 366-374 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11769 LNCS)
• Towards increased trustworthiness of deep learning segmentation methods on cardiac MRI
  Sander, Jörg, De Vos, Bob D., Wolterink, Jelmer M., Išgum, Ivana jan 2019 in Towards increased trustworthiness of deep learning segmentation methods on cardiac MRI: Medical Imaging 2019 p. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10949)
• Improving myocardium segmentation in cardiac CT angiography using spectral information
  Bruns, Steffen, Wolterink, Jelmer M., Van Hamersvelt, Robbert W., Zreik, Majd, Leiner, Tim, Išgum, Ivana jan 2019 in Improving myocardium segmentation in cardiac CT angiography using spectral information: Medical Imaging 2019 p. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10949)
• Cardiovascular diseases
  Verjans, Johan, Veldhuis, Wouter B., Carneiro, Gustavo, Wolterink, Jelmer M., Išgum, Ivana, Leiner, Tim jan 2019 in Cardiovascular diseases: Artificial Intelligence in Medical Imaging p. 167-185 (; vol. )
• Commonly available hematological biomarkers are associated with the extent of coronary calcifications
  den Harder, Annemarie M., de Jong, Pim A., de Groot, Mark C.H., Wolterink, Jelmer M., Budde, Ricardo P.J., Išgum, Ivana, van Solinge, Wouter W., ten Berg, Maarten J., Lutgens, Esther, Veldhuis, Wouter B., Haitjema, Saskia, Hoefer, Imo E., Leiner, Tim Aug 2018 in Atherosclerosis 275 p. 166-173
• CNN-based Landmark Detection in Cardiac CTA Scans
  Noothout, JMH, de Vos, BD, Wolterink, JM, Leiner, T, Isgum, I jul 2018 in CNN-based Landmark Detection in Cardiac CTA Scans: Medical Imaging with Deep Learning. MIDL Amsterdam p. 1-11 (; vol. )
• OC-0293: Dosimetric evaluation of deep learning based synthetic-CT generation for MR-only brain radiotherapy
  Dinkla, A. M., Wolterink, J. M., Maspero, M., Savenije, M. H. F., Verhoeff, J. J. C., Isgum, I., Seevinck, P. R., Lagendijk, J. J. W., Van den Berg, C. A. T. Apr 2018 in Radiotherapy & Oncology 127 p. S151-S151
• Automatic segmentation of thoracic aorta segments in low-dose chest CT
  Noothout, JMH, de Vos, BD, Wolterink, JM, Isgum, I mar 2018 at Automatic segmentation of thoracic aorta segments in low-dose chest CT
• Automatic segmentation of thoracic aorta segments in low-dose chest CT
  Noothout, Julia M.H., De Vos, Bob D., Wolterink, Jelmer M., Išgum, Ivana mar 2018 in Automatic segmentation of thoracic aorta segments in low-dose chest CT: Medical Imaging 2018 p. (Spie Medical Imaging Proceedings; vol. 10574)
• Deep learning analysis of the myocardium in coronary CT angiography for identification of patients with functionally significant coronary artery stenosis
  Zreik, Majd, Lessmann, Nikolas, van Hamersvelt, Robbert W., Wolterink, Jelmer M., Voskuil, Michiel, Viergever, Max A., Leiner, Tim, Išgum, Ivana Feb 2018 in Medical Image Analysis 44 p. 72-85
• Automatic determination of cardiovascular risk by CT attenuation correction maps in Rb-82 PET/CT
  Išgum, Ivana, de Vos, Bob D, Wolterink, Jelmer M, Dey, Damini, Berman, Daniel S, Rubeaux, Mathieu, Leiner, Tim, Slomka, Piotr J Dec 2018 in Journal of Nuclear Cardiology 25 (6), p. 2133-2142
• Deep Learning Techniques for Automatic MRI Cardiac Multi-structures Segmentation and Diagnosis: Is the Problem Solved?
  Bernard, Olivier, Lalande, Alain, Zotti, Clement, Cervenansky, Frederick, Yang, Xin, Heng, Pheng Ann, Cetin, Irem, Lekadir, Karim, Camara, Oscar, Ballester, Miguel Angel Gonzalez, Sanroma, Gerard, Napel, Sandy, Petersen, Steffen, Tziritas, Georgios, Grinias, Elias, Khened, Mahendra, Kollerathu, Varghese Alex, Krishnamurthi, Ganapathy, Rohe, Marc Michel, Pennec, Xavier, Sermesant, Maxime, Isensee, Fabian, Jager, Paul, Maier-Hein, Klaus H., Baumgartner, Chrisitan F., Koch, Lisa M., Wolterink, Jelmer M., Isgum, Ivana, Jang, Yeonggul, Hong, Yoonmi, Patravali, Jay, Jain, Shubham, Humbert, Olivier, Jodoin, Pierre Marc Nov 2018 in IEEE Transactions on Medical Imaging 37 (11), p. 2514-2525
• MR-Only Brain Radiation Therapy: Dosimetric Evaluation of Synthetic CTs Generated by a Dilated Convolutional Neural Network
  Dinkla, Anna M., Wolterink, Jelmer M., Maspero, Matteo, Savenije, Mark H.F., Verhoeff, Joost J.C., Seravalli, Enrica, Išgum, Ivana, Seevinck, Peter R., van den Berg, Cornelis A.T. Nov 2018 in International Journal of Radiation Oncology Biology Physics 102 (4), p. 801-812
• Automatic segmentation and disease classification using cardiac cine MR images
  Wolterink, Jelmer M., Leiner, Tim, Viergever, Max A., Išgum, Ivana jan 2018 in Automatic segmentation and disease classification using cardiac cine MR images: Statistical Atlases and Computational Models of the Heart p. 101-110 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10663 LNCS)
• Erratum to: Automatic determination of cardiovascular risk by CT attenuation correction maps in Rb-82 PET/CT
  Išgum, Ivana, de Vos, Bob D, Wolterink, Jelmer M, Dey, Damini, Berman, Daniel S., Rubeaux, Mathieu, Leiner, Tim, Slomka, Piotr J. 2018 in Journal of Nuclear Cardiology 25 (6), p. 2143
• ConvNet-Based Localization of Anatomical Structures in 3D Medical Images
  de Vos, Bob, Wolterink, Jelmer, de Jong, Pim, Leiner, Tim, Viergever, Max, Isgum, Ivana Jul 2017 in IEEE Transactions on Medical Imaging 36 (7), p. 1470-1481
• Generative Adversarial Networks for Noise Reduction in Low-Dose CT
  Wolterink, Jelmer M, Leiner, Tim, Viergever, Max A, Isgum, Ivana Dec 2017 in IEEE Transactions on Medical Imaging 36 (12), p. 2536-2545
• Dilated convolutional neural networks for cardiovascular MR segmentation in congenital heart disease
  Wolterink, Jelmer M., Leiner, Tim, Viergever, Max A., Išgum, Ivana 2017 in Dilated convolutional neural networks for cardiovascular MR segmentation in congenital heart disease: Reconstruction, Segmentation, and Analysis of Medical Images - 1st International Workshops, RAMBO 2016 and HVSMR 2016 Held in Conjunction with MICCAI 2016, Revised Selected Papers p. 95-102 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10129 LNCS)
• Deep MR to CT synthesis using unpaired data
  Wolterink, Jelmer M., Dinkla, Anna M., Savenije, Mark H.F., Seevinck, Peter R., van den Berg, Cornelis A.T., Išgum, Ivana 2017 in Deep MR to CT synthesis using unpaired data: Simulation and Synthesis in Medical Imaging p. 14-23 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10557 LNCS)
• Automatic coronary artery calcium scoring in cardiac CT angiography using paired convolutional neural networks
  Wolterink, Jelmer M, Leiner, Tim, de Vos, Bob D, van Hamersvelt, Robbert W, Viergever, Max A, Išgum, Ivana Dec 2016 in Medical Image Analysis 34 p. 123-136
• Submillisievert coronary calcium quantification using model-based iterative reconstruction: A within-patient analysis
  den Harder, Annemarie M, Wolterink, Jelmer M, Willemink, Martin J, Schilham, Arnold M R, de Jong, Pim A, Budde, Ricardo P J, Nathoe, Hendrik M, Išgum, Ivana, Leiner, Tim Nov 2016 in European Journal of Radiology 85 (11), p. 2152-2159
• An evaluation of automatic coronary artery calcium scoring methods with cardiac CT using the orCaScore framework
  Wolterink, Jelmer M, Leiner, Tim, de Vos, Bob D, Coatrieux, Jean-Louis, Kelm, B Michael, Kondo, Satoshi, Salgado, Rodrigo A, Shahzad, Rahil, Shu, Huazhong, Snoeren, Miranda, Takx, Richard A P, van Vliet, Lucas J, van Walsum, Theo, Willems, Tineke P, Yang, Guanyu, Zheng, Yefeng, Viergever, Max A, Išgum, Ivana 2016 in Medical Physics 43 (5), p. 2361-2373
• 2D image classification for 3D anatomy localization: Employing deep convolutional neural networks
  De Vos, Bob D., Wolterink, Jelmer M., De Jong, Pim A., Viergever, Max A., Išgum, Ivana 2016 in 2D image classification for 3D anatomy localization:Employing deep convolutional neural networks Medical Imaging 2016 p. (Proceedings of SPIE; vol. 9784 )
• Automatic detection of cardiovascular risk in CT attenuation correction maps in Rb-82 PET/CTs
  Išgum, Ivana, De Vos, Bob D., Wolterink, Jelmer M., Dey, Damini, Berman, Daniel S., Rubeaux, Mathieu, Leiner, Tim, Slomka, Piotr J. 2016 in Automatic detection of cardiovascular risk in CT attenuation correction maps in Rb-82 PET/CTs: Medical Imaging 2016: Image Processing p. (Proceedings of SPIE; vol. 9784)
• Deep learning for multi-task medical image segmentation in multiple modalities
  Moeskops, Pim, Wolterink, Jelmer M., van der Velden, Bas H M, Gilhuijs, Kenneth G A, Leiner, Tim, Viergever, Max A., Išgum, Ivana 2016 in Deep learning for multi-task medical image segmentation in multiple modalities: Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Proceedings p. 478-486 (Lecture Notes in Computer Science; vol. 9901 )
• Automatic Coronary Calcium Scoring in Non-Contrast-Enhanced ECG-Triggered Cardiac CT With Ambiguity Detection
  Wolterink, Jelmer M., Leiner, Tim, Takx, Richard A. P., Viergever, Max A., Isgum, I Sep 2015 in IEEE Transactions on Medical Imaging 34 (9), p. 1867-1878
• Automatic machine learning based prediction of cardiovascular events in lung cancer screening data
  de Vos, Bob D., de Jong, Pim A., Wolterink, Jelmer M., Vliegenthart, Rosemarijn, Wielingen, Geoffery V. F., Viergever, Max A., Isgum, I 2015 in Automatic machine learning based prediction of cardiovascular events in lung cancer screening data: MEDICAL IMAGING 2015: COMPUTER-AIDED DIAGNOSIS p. (Proceedings of SPIE; vol. 9414)
• Automatic coronary calcium scoring in cardiac CT angiography using convolutional neural networks
  Wolterink, Jelmer M., Leiner, Tim, Viergever, Max A., Isgum, I 2015 in Automatic coronary calcium scoring in cardiac CT angiography using convolutional neural networks: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) p. 589-596 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9349)